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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172172973_172179046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172172973 - 172179046

Intron Length:

6074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCCA

5'SS Class:

strong_major

3'SS Sequence:

TACTTTGGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

ATGTGTTTACTT

Flanking Amino Acid:

ADEFMSDDKQVLKVGVVCAN

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

71.6

40.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

68.6

0.42

61.7

44.2

Minor 5ss

-1.1

2.8

51.5

44.9

Minor BPS

49.5

0.04

69.26

42.8

Associated Gene:

Gene:

CCDC82

Ensembl Gene ID:

ENSAPLG00000004583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004711

172167312 - 172180180

12869