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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172404052_172426316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172404052 - 172426316

Intron Length:

22265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTCTCTTTACA

Flanking Amino Acid:

GRPPSGDSLSSASTSHSDHS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

64.8

41.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

92.5

0.96

0.6

87.6

22.6

Minor 5ss

35.1

-1.7

3.6

50.2

46.4

Minor BPS

69.4

0.6

1.6

80.69

34.2

Associated Gene:

Gene:

MTMR2

Ensembl Gene ID:

ENSAPLG00000004052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004228

172403106 - 172465119

62014