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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172477103_172477971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172477103 - 172477971

Intron Length:

869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCTCC

5'SS Class:

major

3'SS Sequence:

TTCTCCCATCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGCTTTTAATT

Flanking Amino Acid:

NEKSHLLEKQGSLERDRLDQ

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

64.5

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.8

0.38

1.1

64.9

35.7

Minor 5ss

45.8

-0.4

2.7

59.5

45.4

Minor BPS

70.5

0.72

1.2

80.41

Associated Gene:

Gene:

CEP57

Ensembl Gene ID:

ENSAPLG00000003812

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003939

172468490 - 172484221

15732