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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172484600_172485574_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172484600 - 172485574

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCACCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TTTCTCTCCACC

Flanking Amino Acid:

ELSQGQQLCKECRIAHPVVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

71.5

40.2

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

67.7

0.4

0.8

59.1

31.7

Minor 5ss

27.4

-2.6

2.7

31.3

42.4

Minor BPS

53.1

0.08

71.76

39.3

Associated Gene:

Gene:

FAM76B

Ensembl Gene ID:

ENSAPLG00000003717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003810

172484492 - 172494552

10061