Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_172485807_172487394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172485807 - 172487394

Intron Length:

1588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TTCAACTTACTT

Flanking Amino Acid:

CAQNVKQFGTPKPCQYCNII

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

43.2

Major BPS

0.45

0.9

67.6

25.3

Major PPT

85.1

0.79

0.8

76.9

36.6

Minor 5ss

30.2

-2.3

2.6

34.3

41.4

Minor BPS

53.7

0.19

1.9

73.4

43.7

Associated Gene:

Gene:

FAM76B

Ensembl Gene ID:

ENSAPLG00000003717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003810

172484492 - 172494552

10061