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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172652166_172654323_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
172652166 - 172654323

Intron Length:
2158

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCTGTT

5'SS Class:
major

3'SS Sequence:
GGTGTTTTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TATCTTCTAATT

Flanking Amino Acid:
PWLITKEHIQIADSLSELEA

Intron Amino Acid Position:
308

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1.2
76.4
39.6

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
79.4
0.66
0.9
72.9
42.2

Minor 5ss
43.1
-0.8
3.5
67
44.3

Minor BPS
56.6
0.29
1.6
74.85
35.8

Associated Gene:

Gene:
SESN3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

172623325 - 172661444
38120