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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172676145_172681445_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172676145 - 172681445

Intron Length:

5301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CACGCACTAACC

Flanking Amino Acid:

EEESWLVEPQVDDPDNDQQE

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

64.5

0.36

65.2

28.2

Major PPT

76.8

0.6

0.9

72.9

37.4

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

45.2

-0.3

53.24

Associated Gene:

Gene:

ENDOD1

Ensembl Gene ID:

ENSAPLG00000025860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029140

172673260 - 172682680

9421