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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172697772_172699839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172697772 - 172699839

Intron Length:

2068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TCCTTGTTATTT

Flanking Amino Acid:

DLPSHTKIKYRQTTQDAPEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.77

0.8

81.4

34.9

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

47.3

-0.1

2.2

66.23

45.5

Associated Gene:

Gene:

CWC15

Ensembl Gene ID:

ENSAPLG00000003221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003299

172696584 - 172712277

15694