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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172730686_172732000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172730686 - 172732000

Intron Length:

1315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAG

U12 Branch Point Sequence:

CTTGTTTCCACT

Flanking Amino Acid:

PGTRPAGEKLENSSHGKPPD

Intron Amino Acid Position:

774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

63.6

0.34

1.5

63.1

44.4

Major PPT

77.9

0.63

0.9

71.1

34.4

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

46.1

-0.2

66.64

44.9

Associated Gene:

Gene:

AMOTL1

Ensembl Gene ID:

ENSAPLG00000002742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047476

172730224 - 172769731

39508

ENSAPLT00000035646

172728044 - 172772143

44100

ENSAPLT00000002791

172730582 - 172769731

39150