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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172733160_172735035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172733160 - 172735035

Intron Length:

1876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

CATATTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

ATCCCTGTAAGC

Flanking Amino Acid:

ANRRCQDMEYTIKNLHAKII

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

64.8

41.3

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

72.7

0.51

41.4

Minor 5ss

30.9

-2.2

3.6

39.8

Minor BPS

45.6

-0.3

2.2

57.43

41.8

Associated Gene:

Gene:

AMOTL1

Ensembl Gene ID:

ENSAPLG00000002742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047476

172730224 - 172769731

39508

ENSAPLT00000035646

172728044 - 172772143

44100