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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172735162_172736140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172735162 - 172736140

Intron Length:

979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATGT

5'SS Class:

strong_major

3'SS Sequence:

ACCACTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCCCCCCTCACC

Flanking Amino Acid:

MNTAATAATERDASAPSHSR

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.6

33.4

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

64.8

0.33

57.3

42.6

Minor 5ss

34.2

-1.8

3.2

47.6

47.9

Minor BPS

47.9

-0.1

2.1

60.5

44.7

Associated Gene:

Gene:

AMOTL1

Ensembl Gene ID:

ENSAPLG00000002742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047476

172730224 - 172769731

39508

ENSAPLT00000035646

172728044 - 172772143

44100