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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172736332_172739074_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172736332 - 172739074

Intron Length:

2743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

GGGTGAGTATCC

Flanking Amino Acid:

RELDSLRMQQRQGSYQANSL

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

80.8

0.69

0.9

78.1

30.7

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

35.5

-1.1

2.4

44.76

43.1

Associated Gene:

Gene:

AMOTL1

Ensembl Gene ID:

ENSAPLG00000002742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035646

172728044 - 172772143

44100

ENSAPLT00000002791

172730582 - 172769731

39150