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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172739225_172744396_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172739225 - 172744396

Intron Length:

5172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

ATCCCCTGGAGC

Flanking Amino Acid:

QAKVIKLEEELRRKQAYVEK

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

-2.6

3.3

37.6

47.1

Minor BPS

-0.1

1.8

58.34

40.5

Associated Gene:

Gene:

AMOTL1

Ensembl Gene ID:

ENSAPLG00000002742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035646

172728044 - 172772143

44100

ENSAPLT00000002791

172730582 - 172769731

39150