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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172769791_172771996_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

172769791 - 172771996

Intron Length:

2206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCACCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TGAGCACTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

64.5

0.36

65.2

28.2

Major PPT

66.4

0.37

0.8

58.8

31.8

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

48.2

-0.1

62.45

42.1

Associated Gene:

Gene:

AMOTL1

Ensembl Gene ID:

ENSAPLG00000002742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035646

172728044 - 172772143

44100