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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172922379_172932451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172922379 - 172932451

Intron Length:

10073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAACCGGC

5'SS Class:

major

3'SS Sequence:

CTTCGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTGTGATCACT

Flanking Amino Acid:

SLAFAQEISIGAQISCFAPS

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.35

1.3

52.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.5

0.78

0.8

76.2

37.8

Minor 5ss

42.7

-0.8

3.3

59.1

45.8

Minor BPS

40.6

-0.6

2.5

64.66

45.8

Associated Gene:

Gene:

PANX1

Ensembl Gene ID:

ENSAPLG00000016177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030737

172908211 - 172933061

24851

ENSAPLT00000016873

172908211 - 172933061

24851