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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172936546_172936625_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172936546 - 172936625

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGGTTT

5'SS Class:

major

3'SS Sequence:

TCTCTTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TCCTCATGAGCT

Flanking Amino Acid:

TTAENRTTAKDYSSQEGTLW

Intron Amino Acid Position:

1096

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

72.1

39.9

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

81.8

0.72

0.9

79.9

32.1

Minor 5ss

48.3

-0.1

3.1

64.2

47.3

Minor BPS

49.1

0.01

70.08

46.3

Associated Gene:

Gene:

HEPHL1

Ensembl Gene ID:

ENSAPLG00000015713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016404

172936343 - 172968966

32624