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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172937836_172938496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172937836 - 172938496

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTAAA

5'SS Class:

major

3'SS Sequence:

TGCCTTGCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

AGACCCTTACGA

Flanking Amino Acid:

HFHAQTFIFKTDKDHRGDVY

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.2

75.3

36.2

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

70.3

0.46

0.9

36.8

Minor 5ss

-2.3

2.7

33.5

41.8

Minor BPS

48.1

-0.1

1.9

57.11

41.7

Associated Gene:

Gene:

HEPHL1

Ensembl Gene ID:

ENSAPLG00000015713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016404

172936343 - 172968966

32624