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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172938637_172939338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172938637 - 172939338

Intron Length:

702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAGG

5'SS Class:

major

3'SS Sequence:

GTCATTCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CAGTTATTAATC

Flanking Amino Acid:

KDFVEGNSKHAINGKIYNSL

Intron Amino Acid Position:

969

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

67.1

43.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.5

0.64

0.9

69.3

41.7

Minor 5ss

41.4

-1

2.5

47.9

Minor BPS

54.9

0.13

1.6

59.9

39.7

Associated Gene:

Gene:

HEPHL1

Ensembl Gene ID:

ENSAPLG00000015713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016404

172936343 - 172968966

32624