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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172944859_172946962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172944859 - 172946962

Intron Length:

2104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTTCC

5'SS Class:

major

3'SS Sequence:

CTTTCATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

AATTACTTACAT

Flanking Amino Acid:

GTALMQPDRVGTFKVVCRTF

Intron Amino Acid Position:

694

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

66.9

39.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.5

0.71

0.8

73.9

35.7

Minor 5ss

-1.1

2.9

Minor BPS

54.4

0.22

1.9

74.36

41.6

Associated Gene:

Gene:

HEPHL1

Ensembl Gene ID:

ENSAPLG00000015713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016404

172936343 - 172968966

32624