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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172947176_172948446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172947176 - 172948446

Intron Length:

1271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGAAAT

5'SS Class:

major

3'SS Sequence:

TCTTCTCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATCCAC

U12 Branch Point Sequence:

TTTTCTTCTCCT

Flanking Amino Acid:

EDFKESNKMHAVNGYLFGNL

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.1

34.1

Major BPS

50.8

0.02

1.2

62.2

34.6

Major PPT

85.5

0.8

0.7

77.5

31.3

Minor 5ss

41.4

-1

2.9

54.4

Minor BPS

42.4

-0.5

3.7

80.12

Associated Gene:

Gene:

HEPHL1

Ensembl Gene ID:

ENSAPLG00000015713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016404

172936343 - 172968966

32624