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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172948598_172949062_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172948598 - 172949062

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTCAGC

5'SS Class:

major

3'SS Sequence:

TCCTTGGCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGATTTTAATG

Flanking Amino Acid:

KNVLNEGGTQKGIDREFYLL

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.1

56.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.7

0.56

0.9

67.9

37.8

Minor 5ss

33.3

-1.9

3.1

43.6

Minor BPS

55.5

0.03

1.4

54.64

41.7

Associated Gene:

Gene:

HEPHL1

Ensembl Gene ID:

ENSAPLG00000015713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016404

172936343 - 172968966

32624