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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172955872_172957649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172955872 - 172957649

Intron Length:

1778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGAGC

5'SS Class:

major

3'SS Sequence:

GTTTGCAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

CTCTTTTTAGCA

Flanking Amino Acid:

LIGPLLVCKKGTADETSIER

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

60.8

43.9

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

67.3

0.39

64.2

41.7

Minor 5ss

31.6

-2.1

3.3

43.6

Minor BPS

58.5

0.26

1.6

65.92

41.4

Associated Gene:

Gene:

HEPHL1

Ensembl Gene ID:

ENSAPLG00000015713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016404

172936343 - 172968966

32624