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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172957863_172958678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172957863 - 172958678

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATGTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATG

Flanking Amino Acid:

HGVFYDKDSEGALYPDGTGG

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.2

0.41

67.3

43.3

Minor 5ss

32.4

-2

3.5

48.3

47.4

Minor BPS

72.1

0.56

1.2

71.31

36.2

Associated Gene:

Gene:

HEPHL1

Ensembl Gene ID:

ENSAPLG00000015713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016404

172936343 - 172968966

32624