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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172982870_172985922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

172982870 - 172985922

Intron Length:

3053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACACAA

U12 Branch Point Sequence:

ACCACAGTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

51.9

0.05

0.9

27.3

Major PPT

82.3

0.73

0.8

80.8

31.2

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

-0.3

2.2

55.42

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036040

172982028 - 172996126

14099