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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172989520_172994453_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172989520 - 172994453

Intron Length:

4934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTTCATTTAATG

Flanking Amino Acid:

GAGCCANRCGMLLSVFLSLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

38.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

91.3

0.93

0.6

89.3

19.5

Minor 5ss

34.7

-1.7

2.6

34.1

41.4

Minor BPS

58.4

0.13

1.6

62.64

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036040

172982028 - 172996126

14099

ENSAPLT00000016181

172983085 - 172996126

13042