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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172994600_172995409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172994600 - 172995409

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TTCTTTATCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTTCTTTATCA

Flanking Amino Acid:

YIYPFRNNTLEYNYLFNQTT

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

71.6

40.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.6

0.78

0.8

80.3

30.3

Minor 5ss

35.2

-1.7

2.8

40.2

Minor BPS

71.4

0.67

1.5

78.76

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036040

172982028 - 172996126

14099

ENSAPLT00000016181

172983085 - 172996126

13042