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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173002480_173003503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173002480 - 173003503

Intron Length:

1024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCGTGTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TAAGACTTACCT

Flanking Amino Acid:

NVCIGLFTATATWVGGAYIN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

81.8

0.72

0.9

75.5

38.4

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

51.9

0.14

1.9

71.13

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016078

173002302 - 173010185

7884