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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173005457_173005947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173005457 - 173005947

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATAAC

5'SS Class:

major

3'SS Sequence:

CCTTCTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

AAATACTTGACC

Flanking Amino Acid:

FWFAAILASLGATMRVILDI

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

74.7

35.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

81.2

0.7

76.8

25.2

Minor 5ss

34.9

-1.7

2.8

36.9

40.6

Minor BPS

62.6

0.38

1.5

67.16

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016078

173002302 - 173010185

7884