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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173007939_173008858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173007939 - 173008858

Intron Length:

920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATGAA

U12 Branch Point Sequence:

TTTTCTGTGACT

Flanking Amino Acid:

VLIGAVAASTDWNKTSYGLP

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

55.3

0.13

1.1

47.4

Major PPT

74.2

0.55

74.5

34.2

Minor 5ss

34.9

-1.7

3.3

47.4

Minor BPS

68.2

0.65

90.81

33.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016078

173002302 - 173010185

7884