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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173025280_173028055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173025280 - 173028055

Intron Length:

2776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTTGTAGC

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

ATCACCTCCACA

Flanking Amino Acid:

APARAPGRSKAPGGVSLTVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.7

0.37

1.2

60.9

43.8

Major BPS

64.9

0.37

29.8

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

38.1

-1.3

2.4

38.6

39.5

Minor BPS

48.8

-0.1

62.84

43.2

Associated Gene:

Gene:

VSTM5

Ensembl Gene ID:

ENSAPLG00000015398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016044

173025192 - 173030284

5093