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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173036230_173037533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173036230 - 173037533

Intron Length:

1304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGACTTG

5'SS Class:

major

3'SS Sequence:

TGTTCTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATAAGATGAACT

Flanking Amino Acid:

QELQDFLLSQMSQHQVHAVQ

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

44.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

83.1

0.74

0.8

Minor 5ss

45.4

-0.5

3.3

63.6

48.1

Minor BPS

45.9

-0.2

2.1

66.81

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015771

173035051 - 173046894

11844