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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173040604_173041118_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173040604 - 173041118

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTA

5'SS Class:

strong_major

3'SS Sequence:

TCTACTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTATCCTTAATT

Flanking Amino Acid:

KNQIISQPFPGLQLSISLCH

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

77.8

33.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.4

0.62

0.9

72.5

37.4

Minor 5ss

40.1

-1.1

3.4

55.5

48.7

Minor BPS

84.2

1.15

89.99

33.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015771

173035051 - 173046894

11844