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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173048342_173049803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173048342 - 173049803

Intron Length:

1462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTCTC

5'SS Class:

major

3'SS Sequence:

TCTTTACTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CTTTCTTTACTC

Flanking Amino Acid:

CQPVIVSRDPGFDLRTEHTH

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

66.3

39.5

Major BPS

0.6

65.6

41.1

Major PPT

82.4

0.73

0.8

77.4

30.1

Minor 5ss

35.5

-1.6

3.1

50.3

40.1

Minor BPS

65.8

0.47

1.6

73.34

38.7

Associated Gene:

Gene:

C11orf54

Ensembl Gene ID:

ENSAPLG00000014882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015530

173048168 - 173055064

6897