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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173050677_173052537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173050677 - 173052537

Intron Length:

1861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

ATAACTTTATTC

Flanking Amino Acid:

SSRILGVNAEVIEVKANGRT

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

81.4

32.7

Major BPS

75.1

0.62

65.6

Major PPT

85.3

0.79

0.8

77.2

36.7

Minor 5ss

31.4

-2.1

2.5

36.7

40.4

Minor BPS

54.1

0.11

1.6

62.24

37.3

Associated Gene:

Gene:

C11orf54

Ensembl Gene ID:

ENSAPLG00000014882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015530

173048168 - 173055064

6897