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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173072504_173073049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173072504 - 173073049

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TGTCTTTTGAAG

Flanking Amino Acid:

SRQKESFLLPGKKGAVVNQL

Intron Amino Acid Position:

1676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

31.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

70.8

0.47

1.1

71.4

38.6

Minor 5ss

50.1

0.01

2.4

63.4

43.4

Minor BPS

50.7

-0.1

1.5

57.25

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015429

173071584 - 173107815

36232

ENSAPLT00000035879

173071352 - 173107948

36597

ENSAPLT00000018999

173071622 - 173109103

37482