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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173073254_173073544_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173073254 - 173073544

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CTTTGCTGAAAG

Flanking Amino Acid:

DRQHPSHQTAVMRLEFPSAS

Intron Amino Acid Position:

1608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

83.3

28.2

Major BPS

0.42

1.1

57.3

41.7

Major PPT

92.3

0.95

0.6

92.1

18.5

Minor 5ss

36.1

-1.6

2.7

45.4

42.7

Minor BPS

49.6

-0.1

2.1

61.48

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035879

173071352 - 173107948

36597

ENSAPLT00000018999

173071622 - 173109103

37482

ENSAPLT00000015429

173071584 - 173107815

36232