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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173083007_173088691_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173083007 - 173088691

Intron Length:

5685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TACACTTTGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAC

U12 Branch Point Sequence:

TTCTGTTACACT

Flanking Amino Acid:

LMSAETSCDSAQSQDSLTAR

Intron Amino Acid Position:

1131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

29.3

Major BPS

55.1

0.13

1.2

66.7

Major PPT

65.9

0.36

65.7

40.5

Minor 5ss

26.1

-2.7

2.9

29.9

43.2

Minor BPS

45.7

-0.2

2.4

70.57

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018999

173071622 - 173109103

37482

ENSAPLT00000015429

173071584 - 173107815

36232

ENSAPLT00000035879

173071352 - 173107948

36597