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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173090441_173090588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173090441 - 173090588

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTATCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AAAACTTTATCT

Flanking Amino Acid:

SQCIDLAGQTEQPEKVLHRE

Intron Amino Acid Position:

1006

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.5

0.82

0.8

80.9

30.7

Minor 5ss

34.5

-1.8

3.4

44.4

Minor BPS

56.2

0.27

1.6

69.49

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015429

173071584 - 173107815

36232

ENSAPLT00000035879

173071352 - 173107948

36597

ENSAPLT00000018999

173071622 - 173109103

37482