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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173096614_173097739_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173096614 - 173097739

Intron Length:

1126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

TGTTCCTTACAG

Flanking Amino Acid:

TEGEVPDESEKHEEAKTHQS

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

0.47

69.9

32.6

Major PPT

80.4

0.68

0.9

73.5

36.5

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

0.27

1.8

69.63

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015429

173071584 - 173107815

36232

ENSAPLT00000035879

173071352 - 173107948

36597

ENSAPLT00000018999

173071622 - 173109103

37482