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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173099780_173102254_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173099780 - 173102254

Intron Length:

2475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CTTTCCTTGAAG

Flanking Amino Acid:

HALKKVHLAQDRERLLKELE

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.1

38.3

Major BPS

0.87

0.8

85.6

Major PPT

74.5

0.55

75.1

27.4

Minor 5ss

37.3

-1.4

3.1

47.6

48.1

Minor BPS

69.9

0.48

1.5

71.8

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035879

173071352 - 173107948

36597

ENSAPLT00000018999

173071622 - 173109103

37482

ENSAPLT00000015429

173071584 - 173107815

36232