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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173138980_173162278_F

Intron Information:

Intron Rank:

132756

Intron Class:

major

Intron Phase:

Intron Coordinates:

173138980 - 173162278

Intron Length:

23299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCAGAA

U12 Branch Point Sequence:

TTGCTCAGAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

52.6

0.07

50.3

35.4

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

44.8

-0.4

1.9

58.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036651

173137258 - 173163078

25821