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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173169673_173175211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173169673 - 173175211

Intron Length:

5539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

GTGCATTTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TGTTTTTTACTA

Flanking Amino Acid:

AYDAEEIKLSSSPEMSILTK

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

72.3

0.5

41.5

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

61.6

0.36

1.5

70.9

Associated Gene:

Gene:

DEUP1

Ensembl Gene ID:

ENSAPLG00000014531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034678

173169457 - 173210698

41242

ENSAPLT00000026362

173169457 - 173210698

41242

ENSAPLT00000015140

173169457 - 173211799

42343