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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173175510_173181152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173175510 - 173181152

Intron Length:

5643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

ATTGCTATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTTCATATTT

Flanking Amino Acid:

ASSKMQEKEERTSQNEDGWH

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

100

1.24

0.5

100

Major PPT

74.3

0.55

0.9

71.4

38.9

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

55.1

0.24

1.9

77.23

39.4

Associated Gene:

Gene:

DEUP1

Ensembl Gene ID:

ENSAPLG00000014531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034678

173169457 - 173210698

41242

ENSAPLT00000026362

173169457 - 173210698

41242

ENSAPLT00000015140

173169457 - 173211799

42343