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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173191147_173196555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173191147 - 173196555

Intron Length:

5409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TACTGTTTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTCATTAAAA

Flanking Amino Acid:

ELSNLSKKLEKQTKSYQFQI

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

77.9

0.63

0.9

72.4

37.5

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

70.2

0.63

1.7

80.92

33.5

Associated Gene:

Gene:

DEUP1

Ensembl Gene ID:

ENSAPLG00000014531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034678

173169457 - 173210698

41242