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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173210645_173211760_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173210645 - 173211760

Intron Length:

1116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

TTTGTTTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TTTGTTTCAACA

Flanking Amino Acid:

AEGAAGGARQVKKTINNMEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

64.8

41.3

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

81.2

0.7

0.9

77.7

35.5

Minor 5ss

35.1

-1.7

3.6

50.2

46.4

Minor BPS

62.3

0.38

1.6

74.67

37.4

Associated Gene:

Gene:

DEUP1

Ensembl Gene ID:

ENSAPLG00000014531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046260

173181822 - 173211799

29978

ENSAPLT00000015140

173169457 - 173211799

42343