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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173237474_173239698_F

Intron Information:

Intron Rank:

139969

Intron Class:

major

Intron Phase:

Intron Coordinates:

173237474 - 173239698

Intron Length:

2225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTACCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

GCATCTGTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.8

79.3

28.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

66.7

0.38

61.3

39.9

Minor 5ss

30.7

-2.2

2.6

33.5

35.6

Minor BPS

46.7

-0.1

2.2

64.81

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021268

173234894 - 173242779

7886