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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173250670_173296180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

173250670 - 173296180

Intron Length:

45511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GTTGTTTTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

89.7

0.98

0.7

89.9

Major PPT

76.7

0.6

0.8

76.4

32.2

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

72.5

0.78

1.3

83.79

37.4

Associated Gene:

Gene:

SLC36A4

Ensembl Gene ID:

ENSAPLG00000014091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019731

173250462 - 173362370

111909