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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173278280_173296180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173278280 - 173296180

Intron Length:

17901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCCGC

5'SS Class:

major

3'SS Sequence:

CTCTCTTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GTTGTTTTAACT

Flanking Amino Acid:

EMDAAGKEELDLEVMKPLID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

54.1

45.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

76.7

0.6

0.8

76.4

32.2

Minor 5ss

32.3

-2

33.6

41.9

Minor BPS

72.5

0.78

1.3

83.79

37.4

Associated Gene:

Gene:

SLC36A4

Ensembl Gene ID:

ENSAPLG00000014091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014697

173278186 - 173362370

84185