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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173297128_173298307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173297128 - 173298307

Intron Length:

1180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCACACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTTTTCTCCACA

Flanking Amino Acid:

PLAIKNAGIVIGPISLVFIG

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

77.2

37.6

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

71.3

0.48

0.9

64.2

36.6

Minor 5ss

37.2

-1.4

46.5

42.8

Minor BPS

61.2

0.35

79.1

37.4

Associated Gene:

Gene:

SLC36A4

Ensembl Gene ID:

ENSAPLG00000014091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014697

173278186 - 173362370

84185

ENSAPLT00000019731

173250462 - 173362370

111909