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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173298397_173299329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173298397 - 173299329

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TCTTTCTTCACT

Flanking Amino Acid:

LVRCSHCLCQRLKKSSLGYS

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

78.6

35.9

Major BPS

0.85

0.9

39.9

Major PPT

84.1

0.77

0.8

81.4

34.9

Minor 5ss

35.7

-1.6

3.4

48.7

47.5

Minor BPS

0.77

1.7

86.99

39.2

Associated Gene:

Gene:

SLC36A4

Ensembl Gene ID:

ENSAPLG00000014091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019731

173250462 - 173362370

111909

ENSAPLT00000014697

173278186 - 173362370

84185